129 entries « 3 of 3 »

2014

Singh, Prashant; Ferranti, Francesco; Deschrijver, Dirk; Couckuyt, Ivo; Dhaene, Tom

Classification aided domain reduction for high dimensional optimization Proceedings Article

In: Proceedings of the Winter Simulation Conference 2014, pp. 3928–3939, IEEE 2014.

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Hellander, Andreas; Lawson, Michael J.; Drawert, Brian; Petzold, Linda R.

Local error estimates for adaptive simulation of the reaction-diffusion master equation via operator splitting Journal Article

In: J. Comput. Phys., vol. 266, pp. 89–100, 2014.

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Horuk, Christopher B.; Douglas, Geoffrey; Gupta, Anand; Krintz, Chandra; Bales, Benjamin B.; Bellesia, Giovanni; Drawert, Brian; Wolski, Rich; Petzold, Linda R.; Hellander, Andreas

Automatic and portable cloud deployment for scientific simulations Proceedings Article

In: International Conference on High Performance Computing & Simulation, HPCS 2014, Bologna, Italy, 21-25 July, 2014, pp. 374–381, IEEE, 2014.

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2013

Singh, Prashant; Deschrijver, Dirk; Pissoort, Davy; Dhaene, Tom

Adaptive classification algorithm for EMC-compliance testing of electronic devices Journal Article

In: Electronics Letters, vol. 49, no. 24, pp. 1526–1528, 2013.

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Singh, Prashant; Deschrijver, Dirk; Dhaene, Tom

A balanced sequential design strategy for global surrogate modeling Proceedings Article

In: 2013 Winter Simulations Conference (WSC), pp. 2172–2179, IEEE 2013.

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Singh, Prashant; Deschrijver, Dirk; Pissoort, Davy; Dhaene, Tom

Accurate hotspot localization by sampling the near-field pattern of electronic devices Journal Article

In: IEEE Transactions on Electromagnetic Compatibility, vol. 55, no. 6, pp. 1365–1368, 2013.

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Singh, Prashant; Deschrijver, Dirk; Pissoort, Davy; Dhaene, Tom

Efficient measurement procedure for hotspot detection in near-field pattern of electronic devices Proceedings Article

In: BESTCOM Meeting, 2013.

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Andrejev, Andrej; Toor, Salman Zubair; Hellander, Andreas; Holmgren, Sverker; Risch, Tore

Scientific Analysis by Queries in Extended SPARQL over a Scalable e-Science Data Store Proceedings Article

In: 9th IEEE International Conference on eScience, eScience 2013, Beijing, China, October 22-25, 2013, pp. 98–106, IEEE Computer Society, 2013.

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Hellander, Andreas; Lawson, Michael J.; Drawert, Brian; Petzold, Linda R.

Local error estimates for adaptive simulation of the Reaction-Diffusion Master Equation via operator splitting Journal Article

In: CoRR, vol. abs/1305.3639, 2013.

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Nettelblad, Carl; Mahjani, Behrang; Holmgren, Sverker

Fast and Accurate Detection of Multiple Quantitative Trait Loci Journal Article

In: J. Comput. Biol., vol. 20, no. 9, pp. 687–702, 2013.

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2012

Drawert, Brian; Engblom, Stefan; Hellander, Andreas

URDME: a modular framework for stochastic simulation of reaction-transport processes in complex geometries Journal Article

In: BMC Syst. Biol., vol. 6, pp. 76, 2012.

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Hellander, Andreas; Hellander, Stefan; Lötstedt, Per

Coupled Mesoscopic and Microscopic Simulation of Stochastic Reaction-Diffusion Processes in Mixed Dimensions Journal Article

In: Multiscale Model. Simul., vol. 10, no. 2, pp. 585–611, 2012.

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Östberg, Per-Olov; Hellander, Andreas; Drawert, Brian; Elmroth, Erik; Holmgren, Sverker; Petzold, Linda R.

Abstractions for Scaling eScience Applications to Distributed Computing Environments - A StratUm Integration Case Study in Molecular Systems Biology Proceedings Article

In: Schier, Jan; Correia, Carlos Manuel B. A.; Fred, Ana L. N.; Gamboa, Hugo (Ed.): BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1 - 4 February, 2012, pp. 290–294, SciTePress, 2012.

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Östberg, Per-Olov; Hellander, Andreas; Drawert, Brian; Elmroth, Erik; Holmgren, Sverker; Petzold, Linda R.

Reducing Complexity in Management of eScience Computations Proceedings Article

In: 12th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing, CCGrid 2012, Ottawa, Canada, May 13-16, 2012, pp. 845–852, IEEE Computer Society, 2012.

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Toor, Salman Zubair

Managing Applications and Data in Distributed Computing Infrastructures PhD Thesis

Uppsala University, Sweden, 2012.

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Toor, Salman Zubair; Töebbicke, Rainer; Resines, Maitane Zotes; Holmgren, Sverker

Investigating an Open Source Cloud Storage Infrastructure for CERN-specific Data Analysis Proceedings Article

In: Seventh IEEE International Conference on Networking, Architecture, and Storage, NAS 2012, Xiamen, China, June 28-30, 2012, pp. 84–88, IEEE Computer Society, 2012.

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Nettelblad, Carl

Two Optimization Problems in Genetics : Multi-dimensional QTL Analysis and Haplotype Inference PhD Thesis

Uppsala University, Sweden, 2012.

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2011

Toor, Salman Zubair; Sabesan, Manivasakan; Holmgren, Sverker; Risch, Tore

A Scalable Architecture for e-Science Data Management Proceedings Article

In: IEEE 7th International Conference on E-Science, e-Science 2011, Stockholm, Sweden, December 5-8, 2011, pp. 210–217, IEEE Computer Society, 2011.

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2010

Caulfield, Emmet; Hellander, Andreas

CellMC - a multiplatform model compiler for the Cell Broadband Engine and x86 Journal Article

In: Bioinform., vol. 26, no. 3, pp. 426–428, 2010.

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Ferm, Lars; Hellander, Andreas; Lötstedt, Per

An adaptive algorithm for simulation of stochastic reaction-diffusion processes Journal Article

In: J. Comput. Phys., vol. 229, no. 2, pp. 343–360, 2010.

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Hellander, Andreas; Lötstedt, Per

Incorporating Active Transport of Cellular Cargo in Stochastic Mesoscopic Models of Living Cells Journal Article

In: Multiscale Model. Simul., vol. 8, no. 5, pp. 1691–1714, 2010.

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Appleton, Owen; Cameron, David G.; Cernák, Jozef; Dóbé, Péter; Ellert, Mattias; Frågåt, Thomas; Grønager, Michael; Johansson, Daniel; Jönemo, Johan; Kleist, Josva; Kocan, Marek; Konstantinov, Aleksandr; Kónya, Balázs; Márton, Iván; Mohn, Bjarte; Möller, Steffen; Müller, Henning; Nagy, Zsombor; Nilsen, Jon K.; Ould-Saada, Farid; Pajchel, Katarina; Qiang, Weizhong; Read, Alexander L.; Rosendahl, Peter; Röczei, Gábor; Savko, Martin; Andersen, Martin Skou; Smirnova, Oxana; Stefán, Péter; Szalai, Ferenc; Taga, Adrian; Toor, Salman Zubair; Wäänänen, Anders; Zhou, Xin

The next-generation ARC middleware Journal Article

In: Ann. des Télécommunications, vol. 65, no. 11-12, pp. 771–776, 2010.

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Jayawardena, Mahen; Nettelblad, Carl; Toor, Salman Zubair; Östberg, Per-Olov; Elmroth, Erik; Holmgren, Sverker

A Grid-Enabled Problem Solving Environment for QTL Analysis in R Proceedings Article

In: Al-Mubaid, Hisham (Ed.): Proceedings of the ISCA 2nd International Conference on Bioinformatics and Computational Biology, BICoB-2010, March 24-26, 2010, Sheraton Waikiki Hotel, Honolulu, Hawaii, USA, pp. 202–209, ISCA, 2010.

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Nilsen, Jon K.; Toor, Salman Zubair; Nagy, Zsombor; Mohn, Bjarte; Read, Alexander L.

Performance and Stability of the Chelonia Storage Cloud Journal Article

In: CoRR, vol. abs/1002.0712, 2010.

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2009

Engblom, Stefan; Ferm, Lars; Hellander, Andreas; Lötstedt, Per

Simulation of Stochastic Reaction-Diffusion Processes on Unstructured Meshes Journal Article

In: SIAM J. Sci. Comput., vol. 31, no. 3, pp. 1774–1797, 2009.

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Nettelblad, Carl; Holmgren, Sverker; Crooks, Lucy; Carlborg, Örjan

cnF2freq: Efficient Determination of Genotype and Haplotype Probabilities in Outbred Populations Using Markov Models Proceedings Article

In: Rajasekaran, Sanguthevar (Ed.): Bioinformatics and Computational Biology, First International Conference, BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings, pp. 307–319, Springer, 2009.

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2008

Ferm, Lars; Lötstedt, Per; Hellander, Andreas

A Hierarchy of Approximations of the Master Equation Scaled by a Size Parameter Journal Article

In: J. Sci. Comput., vol. 34, no. 2, pp. 127–151, 2008.

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2007

Hellander, Andreas; Lötstedt, Per

Hybrid method for the chemical master equation Journal Article

In: J. Comput. Phys., vol. 227, no. 1, pp. 100–122, 2007.

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0000

Singh, Prashant; Spjuth, Ola

Learning Deep Representations of Drug Combination Mechanics Journal Article

In: 0000.

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129 entries « 3 of 3 »